BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C07SP1|AL427289
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1797 1795 0.0
>3x_Contig1797
Length = 34782
Score = 1795 bits (899), Expect = 0.0
Identities = 916/927 (98%), Gaps = 1/927 (0%)
Strand = Plus / Minus
Query: 1 gatcgttcatctagttcttccaattcgctccatttttctaagaacaccttatggctttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19392 gatcgttcatctagttcttccaattcgctccatttttctaagaacaccttatggctttgc 19333
Query: 61 ttcgataataaaawctcttctgatgaagtaatgcaaccagcacaggctaaacagtcttgc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19332 ttcgataataaaatctcttctgatgaagtaatgcaaccagcacaggctaaacagtcttgc 19273
Query: 121 aaactgatcgawaccttctcaggctcactagattcaatgccaacttcaacttcaaatgat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19272 aaactgatcgataccttctcaggctcactagattcaatgccaacttcaacttcaaatgat 19213
Query: 181 ggtttcttctcaaccttttgaggttgagctggtttcacacacgccaaacctgggcttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212 ggtttcttctcaaccttttgaggttgagctggtttcacacacgccaaacctgggcttata 19153
Query: 241 aaawcgttcaaatcggcatccctaagtaacgcactcattgtttctttctatcttaaagat 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19152 aaatcgttcaaatcggcatccctaagtaacgcactcattgtttctttctatcttaaagat 19093
Query: 301 cctcgaaaaagaagctaagcagtagtagtgttttcaaataaaatagtccttagtatgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19092 cctcgaaaaagaagctaagcagtagtagtgttttcaaataaaatagtccttagtatgcaa 19033
Query: 361 cttgaatcgtttttggctttgtattctgaacgttcttatatgggcttctcttatgctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19032 cttgaatcgtttttggctttgtattctgaacgttcttatatgggcttctcttatgctact 18973
Query: 421 ctgagtccatcacaatgaaatcacttactaataaatcctctgtctcagtttctcttataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18972 ctgagtccatcacaatgaaatcacttactaataaatcctctgtctcagtttctcttataa 18913
Query: 481 ttwcttttgaattgactaatcaatatgtcaacatcgcaagtgtcatgaataacatattct 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18912 tttcttttgaattgactaatcaatatgtcaacatcgcaagtgtcatgaataacatattct 18853
Query: 541 cattcacgtgactaavacttgataaagatacccgcctttgattttgtttacggcagarac 600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 18852 cattcacgtgactaaaacttgataaagatacccgcctttgattttgtttacggcagaaac 18793
Query: 601 tgagaacaattattctcaccgccgacatgctttcggtttggatttctgctttagcattga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18792 tgagaacaattattctcaccgccgacatgctttcggtttggatttctgctttagcattga 18733
Query: 661 ggttgaraattatattatkagawcagtgccaaaactgtgatgttttattatgaactgaga 720
|||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 18732 ggttgaaaattatattattagatcagtgccaaaactgtgatgttttattatgaactgaga 18673
Query: 721 catcagtcgaaaaagtggacataagaaaagagatatagtgaaagaaatacaaataaaccc 780
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18672 catcagtcgaaaaagtggacataag-aaagagatatagtgaaagaaatacaaataaaccc 18614
Query: 781 tgcacttggctttgctagaggttaaacatagaagacctgttaacgattaggtacgtttag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18613 tgcacttggctttgctagaggttaaacatagaagacctgttaacgattaggtacgtttag 18554
Query: 841 aagactttcttatcgaatcgggttgctctttcatgtgttacacgtcttttatacagcata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18553 aagactttcttatcgaatcgggttgctctttcatgtgttacacgtcttttatacagcata 18494
Query: 901 aaaawaaaggccattccaaaaagttgt 927
|||| ||||||||||||||||||||||
Sbjct: 18493 aaaataaaggccattccaaaaagttgt 18467
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6515
Number of Sequences: 1807
Number of extensions: 6515
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)